Insertion junction: CLIP2.042014_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042014
Chromosome:chromosome 11
Location:1166510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467680 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGGGAACGGTGGATTTTATTTGGTACACTTCAGATCCAATCCCCGGC
Internal bar code:ACCCAAATTTGATTTGCCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2235
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATAGCGCACCGTCGAAG
Suggested primer 2:CTATCCTCTCTGCACCAGCG