Insertion junction: CLIP2.042017_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042017
Chromosome:chromosome 11
Location:4097331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481104 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTGTTGCAAAGATTGGCACAGAGAAGTGTAGCGAAAGGGGGGAGGTA
Internal bar code:TGGGTCTAATAGCATTTTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1139
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGGGCTGTAGCACCTTC
Suggested primer 2:CCGTCCCCTCCTCCTCTTTA