Insertion junction: CLIP2.042022_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042022
Chromosome:chromosome 17
Location:3502303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724200 LAL1 (1 of 1) K11090 - lupus La protein (LA, SSB); La protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGTAGGTACCGTATCATCTCGGGGCGCATACCCGTACCTTCTTACAG
Internal bar code:TTTCAGAAATTGAGAATGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCGGGTAAGATCTGCG
Suggested primer 2:CACTCAACACTTGCACTGCC