Insertion junction: CLIP2.042027_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042027
Chromosome:chromosome 16
Location:2771100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662250 (1 of 1) PF15901 - Sortilin, neurotensin receptor 3, C-terminal (Sortilin_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATTTACAGCCCCCCTCCCCTCACCGGCAGGTCCGTGCAGTTGCCGCT
Internal bar code:TCGATTTTCGCTGCAGAGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGATTGCGGTAGCCATG
Suggested primer 2:GGACAGCCGTTTCACAACAC