Insertion junction: CLIP2.042027_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042027
Chromosome:chromosome 16
Location:2771102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662250 (1 of 1) PF15901 - Sortilin, neurotensin receptor 3, C-terminal (Sortilin_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCCAAACTAAACCAAAACCAACGAAAACGAGCGGAGCACAGGCAGA
Internal bar code:GACACAAGGTCCGAGATTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:358
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGCCGTTTCACAACAC
Suggested primer 2:GCTTGATTGCGGTAGCCATG