Insertion junction: CLIP2.042030_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042030
Chromosome:chromosome 9
Location:6345306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414350 (1 of 3) PF04824//PF04825 - Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8) // N terminus of Rad21 / Rec8 like protein (Rad21_Rec8_N) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACTCAGGTTTAAGGTAGACGTCCACCACCTTGGCAATGGCGGTGCCG
Internal bar code:ACGCCTGCATGCGTTAATTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1917
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GGATAGCTACCACGGAAGGC
Suggested primer 2:GGTACTTGCCTGCAGCTACA