Insertion junction: CLIP2.042033_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042033
Chromosome:chromosome 9
Location:2444889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393400 VTE4 Tocopherol O-methyltransferase/gamma-tocopherol methyltransferase; (1 of 1) 2.1.1.95 - Tocopherol O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGAGTGTGAGCGCAAGCCCAGCCACGGCATCAGTCGCATACGTCCTC
Internal bar code:GTAGCTTTAATTATGACTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGTTCGGTGAGGCAGAG
Suggested primer 2:AACCCCCGCTACTCTAACCT