Insertion junction: CLIP2.042036_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042036
Chromosome:chromosome 11
Location:1011259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGCAGTGTAAATCTGTTCGGCAGTTCGGCTGTGTGTTCGGTCCCGC
Internal bar code:GTTTGAAAATGGTTTCGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1646
LEAP-Seq percent confirming:81.5385
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTCGAGGCATGCACGAG
Suggested primer 2:CAAGGAAGAAGAGGCCCCAG