Insertion junction: CLIP2.042036_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042036
Chromosome:chromosome 16
Location:1970089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656400 SQD1 (1 of 1) 3.13.1.1 - UDP-sulfoquinovose synthase / Sulfite:UDP-glucose sulfotransferase; UDP-sulfoquinovose synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGGCACATGACACACGTTACACACGCAGGTGCGCTGCATCCAGCTGG
Internal bar code:ACGGCACTGGGGTTCGAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3409
LEAP-Seq percent confirming:89.1892
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATTTCCACCCCGACACT
Suggested primer 2:TGGTCTGTTGGGATGAGTGC