Insertion junction: CLIP2.042041_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042041
Chromosome:chromosome 7
Location:2804378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331700 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCAAACCCCAACGAAACCCTTGTAGTGAAGCCCTAGCCAGCCGAGC
Internal bar code:TGTTGGTGATGCGGTTTCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGTGCTAGGTACCCGTA
Suggested primer 2:GGGTTCTGTGCAAGCACTTG