Insertion junction: CLIP2.042051_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042051
Chromosome:chromosome 1
Location:2684802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016200 MLO4 (1 of 5) PF03094 - Mlo family (Mlo); MLO family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGACGGAGAGGGGCGCCGGAGAAGGGCTGGAGGTCAGAGCGGCGGGC
Internal bar code:AGGATACGGACGCACGCGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCAACCACACCAAGCCAA
Suggested primer 2:CACCGTTGCACCAACTCAAG