Insertion junction: CLIP2.042068_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042068
Chromosome:chromosome 6
Location:5739046
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288550 ECP76 76 kDa extracellular polypeptide; (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGGCGGCTTGCGGTTATGGCCGCCGTACATTTTGTGTGTGTGTGTG
Internal bar code:CCAGACGAGGAACCGCTATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2214
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTAGGTGTTGGACTGCA
Suggested primer 2:CATCCGCGTGTCCTACCTAC