Insertion junction: CLIP2.042071_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042071
Chromosome:chromosome 5
Location:2629476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239978 (1 of 1) PTHR36116//PTHR36116:SF1 - FAMILY NOT NAMED // UPF0060 MEMBRANE PROTEIN YNFA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGCACACACACGACCCCCCCCCCGGCCCAACCAACACCCCCCAAAC
Internal bar code:GAGTCCTGCCATCATCGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:705
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGTGAGCCAACATGCCA
Suggested primer 2:ACAGTCAGCATTGCTCACGA