Insertion junction: CLIP2.042073_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042073
Chromosome:chromosome 3
Location:3770592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169500 FLS2 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL); Flagellar shortening 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCCGGTTACCCTCGCCACCCGCGCCCCAACGCGCCACGTTACTCCG
Internal bar code:TTCTAATGCCGGATGGGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1967
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGTGACTATGGCGGTA
Suggested primer 2:CGTCGTTGGCTTTTTGCAGA