Insertion junction: CLIP2.042077_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042077
Chromosome:chromosome 17
Location:2381549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714200 KUP2,KUP6,KUP1 (1 of 5) K03549 - KUP system potassium uptake protein (kup); Potassium ion uptake transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTCAGGCACCTGCATGCGTGCGTGCGTGGGTGCACGTTTGCACATG
Internal bar code:TTTCTACTTTAATGTGGTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1490
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCGCTCCTCGTGTTATC
Suggested primer 2:AGGAAGTGGATGAGCACGTG