Insertion junction: CLIP2.042080_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042080
Chromosome:chromosome 6
Location:1813712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263500 (1 of 1) PF01951 - Archease protein family (MTH1598/TM1083) (Archease) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCGGGGGCAGCTTTGCTGCGGCCTTCCCCCAGGCCAGCCCCGTGCT
Internal bar code:AGGACCACCTGGGTAGGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2249
LEAP-Seq percent confirming:94.0299
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTACGGAGTGCACTGTCA
Suggested primer 2:CGTACCCTTGCGCTTTGATG