Insertion junction: CLIP2.042083_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042083
Chromosome:chromosome 8
Location:4171314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383650 NUP85 Nucleoporin 85; (1 of 1) K14304 - nuclear pore complex protein Nup85 (NUP85) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCACCCCGCAGGATTTTGTGTCGTGGCTGGCAGTGCACGGCGACGCG
Internal bar code:CCGAGATAGCTATGTAAGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:297
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACTGCACACACACACC
Suggested primer 2:GGTCGTACTGCTGCATCGTA