Insertion junction: CLIP2.042087_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042087
Chromosome:chromosome 11
Location:636638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467612 (1 of 1) PTHR10108//PTHR10108:SF924 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAACGAGTGGAACCCAGGCCACGCACACCACACCCCGCACCCGGCGAT
Internal bar code:ACTATCAATAGCTAGTTATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2548
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTTGTTGCTCCAGTAT
Suggested primer 2:TTTCCGCAGCCGTAGAACTT