Insertion junction: CLIP2.042095_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042095
Chromosome:chromosome 15
Location:546956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636176 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGAAGTCGTGTCCGAACACGTGGCCCCCCACCGCCTGTGGGTTGCAA
Internal bar code:CCTCTGAGCTTTGTATATTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2315
LEAP-Seq percent confirming:78.3333
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGACCTGCCAGATCACTT
Suggested primer 2:CCGCTCGTTTTCGTTGGTTT