Insertion junction: CLIP2.042096_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042096
Chromosome:chromosome 6
Location:1450347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260150 SMM17,FAP393 Flagellar Associated Protein 393; (1 of 1) PTHR12176//PTHR12176:SF16 - UNCHARACTERIZED // PROTEIN C17E4.11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTCAGGAGGACGTTGCATACATTTATATGATGACCAAGTAGATCCCG
Internal bar code:TCGGTTTTGTTCGGGTGTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2129
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCTTACTGGCAGGTGG
Suggested primer 2:CACACACACACATGCATGCA