Insertion junction: CLIP2.042098_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042098
Chromosome:chromosome 12
Location:4304362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAAACGTGGCGCGGCCATTGCCGGTGAGGCCAACACTGAAGTCGCTGA
Internal bar code:TTCGACTTAGCGTGCACGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:550
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGCGTGTGTGTGTAC
Suggested primer 2:CTAGTCATGCGTGCGCTTTC