Insertion junction: CLIP2.042106_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042106
Chromosome:chromosome 12
Location:1832118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512450 (1 of 12) PF04749 - PLAC8 family (PLAC8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGACCACGACTCCGCCCTCGAGGACGAGGCCTCCAGCGCCATGGAC
Internal bar code:CCTGAGCAGGCGGGTGCCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1781
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCATACAGCCTGCTATCA
Suggested primer 2:ACCGGTGGTTCTTCTTCGTC