Insertion junction: CLIP2.042107_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042107
Chromosome:chromosome 9
Location:2622113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801018 (1 of 1) PTHR11390//PTHR11390:SF21 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE 3-ALPHA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAAAATGGTAGGGGGGAATGGGGAGTTAACTCTAGACCGGGCGGGG
Internal bar code:GCAATATTATCATTAGCGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGGGGTTAGTGGCAGC
Suggested primer 2:GAGCTCGCGCATACAAAAGG