Insertion junction: CLIP2.042109_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042109
Chromosome:chromosome 16
Location:6123084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677250 TEH5 (1 of 6) 3.1.2.2 - Palmitoyl-CoA hydrolase / Long-chain fatty-acyl-CoA hydrolase; Thioesterase-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCATCGGGCAGGGTGGCGGGAGATGAAAGAGGAAAAGCGGGGACGTGG
Internal bar code:GTCTGCAGTCTCGGCATTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTCCACTACTGTCCACG
Suggested primer 2:ACGACACGAGGTTGACACTC