Insertion junction: CLIP2.042111_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042111
Chromosome:chromosome 4
Location:2839736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224200 (1 of 2) PTHR18841//PTHR18841:SF0 - VITELLINE MEMBRANE OUTER LAYER PROTEIN I-RELATED // PROTEIN C08G5.3, ISOFORM A-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACTTCAAGTACCTGGGCGATGAGCAGAAGATGGGCAAGTGAGTCACAA
Internal bar code:TGTCACTCGGTTATAGTCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGAGAGCAAGGCATGA
Suggested primer 2:AGAGAGCGCGAATACCATGG