Insertion junction: CLIP2.042124_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042124
Chromosome:chromosome 1
Location:565414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003475 (1 of 2) 3.4.24.35 - Gelatinase B / Type V collagenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTGCTGATGGAAGCAAACGGCGTCGCTGCTTTTGCCGATCGGCGAGG
Internal bar code:GTATTAGATTGATATCATTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:18.8679
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACATGCATTGCTCGTCG
Suggested primer 2:CGGGACAAAACACAAGCCTG