Insertion junction: CLIP2.042134_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042134
Chromosome:chromosome 13
Location:4263276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592100 (1 of 1) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCTCACAAGCCGTGACCGTAAGGCTGCTTGACCAAAGCGCAGCGTAC
Internal bar code:TTGGGACGTTGTGCATGAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2423
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGGACGCATTTGTTGTG
Suggested primer 2:GCACATCAGATGCAGAAGCG