Insertion junction: CLIP2.042142_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042142
Chromosome:chromosome 7
Location:4216620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341925 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGGGCTTTGCGCCCAGCCATCGCTGATGCTGCTCGGCACTAATGGC
Internal bar code:TTTACAGTGGGGGCCTCCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1915
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCCCTGATGCTGCTTT
Suggested primer 2:GTGTACAGTGTGGGGAGTGG