Insertion junction: CLIP2.042149_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.042149
Chromosome:chromosome 10
Location:3055038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801138 (1 of 9) IPR011011//IPR013083 - Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGAAGCGGGCAATGCCTGGCGAGGCGAGGAGGGCTCTGGCGTCGGCG
Internal bar code:GTGTCGGAACGCTCTGCTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1229
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACGCATTTATGTGGGC
Suggested primer 2:CAAAGTTGTCCGGGCACTTG