Insertion junction: CLIP2.042155_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042155
Chromosome:chromosome 13
Location:5059213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606600 CGK1 cGMP-dependent protein kinase; (1 of 6) K07376 - protein kinase, cGMP-dependent (PRKG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAACGGAGGAGCTCGACCCAGCGGAGCTTGCGGACGCGCCGCTGACG
Internal bar code:TACGGGCCGTGCTGTGGATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4945
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCAGCGACAGGGTAAAAT
Suggested primer 2:CTTCCTCAACCTGGTGACCC