Insertion junction: CLIP2.042157_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.042157
Chromosome:chromosome 3
Location:4134652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172750 (1 of 1) IPR002893//IPR012677 - Zinc finger, MYND-type // Nucleotide-binding alpha-beta plait domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAGCGCAGACGCTGAGGGTGTCTGTGCGAATGAGCGCGAGCGCCAGT
Internal bar code:CATACGTTATGAAATCCTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAATCCGAACTGCATCAG
Suggested primer 2:CAAGTGCAAACAGCTGGACC