Insertion junction: CLIP2.042165_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042165
Chromosome:chromosome 13
Location:3694979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588271 (1 of 1) PF07556 - Protein of unknown function (DUF1538) (DUF1538) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGGATGAGGATGGAATTCATACATGTTAAAATACGCGCTGCTGGGG
Internal bar code:GGTCAGAGGGGGTTTTAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACTCCTTTCCCACGCTC
Suggested primer 2:CACACGACCTACAGCTTGGT