Insertion junction: CLIP2.042169_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042169
Chromosome:chromosome 3
Location:4180377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173300 (1 of 6) IPR007577//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCTAACAGGGATTTGCGATGGGGGAGCTCTGTGGGGCTGCAGTGTT
Internal bar code:TACATGCAAGCTTATACTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3262
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGTACGACGTCTGTGT
Suggested primer 2:AGGCGTGTGCATGTATCACA