Insertion junction: CLIP2.042169_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042169
Chromosome:chromosome 3
Location:4180421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173300 (1 of 6) IPR007577//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGGAATGCCTGGTACATCTGCAAGTCGTACTTCCTGTGAGGGAGCGG
Internal bar code:AAGAATTATACACGTCTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1843
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGTGTGCATGTATCACA
Suggested primer 2:CAGCAGTACGACGTCTGTGT