Insertion junction: CLIP2.042176_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042176
Chromosome:chromosome 16
Location:5948515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679051 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCACCACGGGGCACTTGATGGCCTTGAACCAGGCCGCGTCCAGCCC
Internal bar code:ATATTAGGTCAACGGCATTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1482
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTGCCAGGCACTTAAA
Suggested primer 2:AGCTGCGTACGCTACTGATC