Insertion junction: CLIP2.042182_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042182
Chromosome:chromosome 9
Location:4533678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401071 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCATGGCGCGGCGTGCCACCCACAGTCGAATGCAGTTGACCGGACCC
Internal bar code:TACCAATATCTCGCATATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4204
LEAP-Seq percent confirming:98.9899
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGACACGACATAGCGTAC
Suggested primer 2:GCAATTAGGCGCAGTTACCG