Insertion junction: CLIP2.042187_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.042187
Chromosome:chromosome 4
Location:3638538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228675 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTCGCCCTCCCCGCCCCTCTCACAGTGCGCCGAGCTCCAGGCGATAG
Internal bar code:ACTACTTTGTGGGATCAAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2308
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGGTTGCAACTGCTGT
Suggested primer 2:CCCAACCCTTACAGAGCTGG