Insertion junction: CLIP2.042194_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.042194
Chromosome:chromosome 1
Location:561595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003463 (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGAGCGTGTGTGCGCATGTGTGCAATTGCGTATGTGTTGCGACCAC
Internal bar code:AGTTTTTCGCTTAGCGACAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGGCGAGAAGGGGATG
Suggested primer 2:GTCACAACACACACGAGCAC