Insertion junction: CLIP2.042199_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042199
Chromosome:chromosome 7
Location:2816789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACCCTGCACGGCGCACACCACCGGTACCCACGCACTGGGCACACGCA
Internal bar code:TGGCATATTCTCAGATAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAATCACACCCCGCACAC
Suggested primer 2:AGGAGCCCGTCTATCTCTCC