Insertion junction: CLIP2.042201_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042201
Chromosome:chromosome 12
Location:2809339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503650 SMM40 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) PTHR10108//PTHR10108:SF894 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGAGTCGGGTGGGGTGGGCTGACCAGGGTGGGGCGCAGGGTATTG
Internal bar code:CATTTCTTTGGCCCACGTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:326
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCATACTCGGAGAAGCC
Suggested primer 2:GGGTCAAAGCCTCCCCTTAC