Insertion junction: CLIP2.042203_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042203
Chromosome:chromosome 17
Location:3570024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGGTGCCGCGCGCATTACGCCGGATGACCGCATCCTGCAGTGCGCC
Internal bar code:TTACTGAATTCATGGAACTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGAACAGAGAATGGCG
Suggested primer 2:CCCCATGAACTTGCAGACCT