Insertion junction: CLIP2.042209_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042209
Chromosome:chromosome 3
Location:8625334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210177 (1 of 3) PF13405//PF13499 - EF-hand domain (EF-hand_6) // EF-hand domain pair (EF-hand_7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCACGCCCCGCCTCACCATCCCCTTCACAGCGCCCCCCCCCCTGCCTC
Internal bar code:GTTATGTGCTTGGGAGACCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1447
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAAGAAGGGGGATTTCGC
Suggested primer 2:GGAGAGGTGAGGCAGTCATG