Insertion junction: CLIP2.042232_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042232
Chromosome:chromosome 9
Location:82989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386250 SMM33 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGCGCCTAGGACAGACAACCACTCAGGACGGTGTATTGTGGCTCGC
Internal bar code:CAGGGTGTGACTAAGCTGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATGCCGGTGTAGGTCA
Suggested primer 2:AACCTGCAACGAGTACCCAG