Insertion junction: CLIP2.042243_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042243
Chromosome:chromosome 9
Location:2657670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801020 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGGGTTTCGGGGCCCAACTGCGAGCCAGGGCTTTGGGGGCGGGCTTG
Internal bar code:GGAGGGTGCTATCTAGGACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGAAGCAGGCGTTTGTG
Suggested primer 2:CGATCAAGACGACGCAACAC