Insertion junction: CLIP2.042253_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042253
Chromosome:chromosome 12
Location:4099735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801401 (1 of 6) 2.7.7.49 - RNA-directed DNA polymerase / Revertase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGCGATCGCACCCTGATTATCACCCTGCATGCACATCGTGCCCACC
Internal bar code:TGAGGCATCGAATACGAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAAATTCGGCATGACGC
Suggested primer 2:ATACGTCTCGCTACGCACAG