Insertion junction: CLIP2.042260_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.042260
Chromosome:chromosome 3
Location:3049207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163850 (1 of 1) K10638 - E3 ubiquitin-protein ligase UHRF1 [EC:6.3.2.19] (UHRF1, NP95) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAATAAAGTGGAGATCTACATAGGAGAGATTCAGGCGCGCTGGTCAG
Internal bar code:GTTTTAGACATGAGCGTGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCATTTCGGCAATACGG
Suggested primer 2:CAGTTTGTTGAGTGCAGGCC