Insertion junction: CLIP2.042262_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042262
Chromosome:chromosome 13
Location:5026381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606300 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGAGGGTACGGGTGCTGATGCTGCTGATGCTGATGCCGCCGACACA
Internal bar code:AATCGGTTCGACCATTTTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1170
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAGCGAAAGACAAGCAC
Suggested primer 2:GGAGTTGACACTGAGCGGAA