Insertion junction: CLIP2.042265_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042265
Chromosome:chromosome 5
Location:2388934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238374 (1 of 1) K11975 - E3 ubiquitin-protein ligase RNF144 [EC:6.3.2.19] (RNF144) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCGGGACCGGGCGGGCGGGCCGGCGCGTCTGCATTACCTCTCCGGC
Internal bar code:ATGGGGCATGCATCCCAGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTAACCGGCATCGTAC
Suggested primer 2:TACTGTTACTGCTGCCACCG