Insertion junction: CLIP2.042267_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042267
Chromosome:chromosome 17
Location:3282142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722050 (1 of 1) K19202 - histone deacetylase complex subunit SAP30 (SAP30) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAAGGGAAAGGCGGAATTCTGTGTCATTGTTCATCGTCGAACGGCTG
Internal bar code:CATAATGCTGCGGGCTTCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2850
LEAP-Seq percent confirming:93.0435
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTGACACCGGTTGTTG
Suggested primer 2:ACTGATGTGGCTGGTGAAGG