Insertion junction: CLIP2.042283_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042283
Chromosome:chromosome 13
Location:3919533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589940 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTGGTAAGTGACGCCCGGAGAGAGCGTGGGTAGGACCAGACCAAAGT
Internal bar code:AGGATCCCCCTAAGGTTCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2218
LEAP-Seq percent confirming:46.9697
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTTCCCAAGACGTCTC
Suggested primer 2:TCGCAAAGTACGACTTGCCT